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Complete documentation is available in the module(1) and modulefile(4) manpages. If you find yourself regularly using a set of module commands, you may want to add these to your configuration files (.bashrc for bash users. Subsequently issuing the load intel command will not automatically reload mvapich2_ib. For example, if intel and mvapich2_ib modules are both loaded, running the command unload intel will automatically unload mvapich2_ib. Also, some modules depend on others so may be loaded or unloaded as a consequence of another module command. For example, if the pgi module is loaded and subsequently the intel module is loaded, the intel compiler will be used.
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Note that the order in which modules are loaded is significant. Show the environment variables used by and how they are affected List the modules that are currently loaded Here are some common module commands and their descriptions: Command
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These include the intel and openmpi_ib modules to set the default compiler environment. Several modules that determine the default TSCC environment are loaded at login time. By unloading the openmpi_ib module, loading the mvapich2_ib module, and compiling with mpif90, the Portland compiler is used but linked with mvapich2 support.
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They also let the user choose between different versions of the same software or different combinations of related codes.įor example, if the pgi module and openmpi_ib module are loaded and the user compiles with mpif90, the generated code is compiled with the Portland Group Fortran 90 compiler and MPI libraries utilizing openmpi are linked. Module commands set, change, or delete environment variables, typically in support of a particular application. The Environment Modules package provides for dynamic modification of a shell environment. You can learn more at the Modules home page. Below is a brief discussion of its common usage. TSCC uses the Environment Modules package to control user environment settings. For non-UCSD users please send public key to to topĮnvironment Modules Managing Your Shell Environment
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To set up ssh keypairs, please follow the instructions for generating ssh keys for Linux/Mac or Windows using Putty. You can use ssh-agent or keychain to avoid repeatedly typing the private key password.
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Make sure you have a password on the private key on your local machine.
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Please feel free to append your public RSA key to your ~/.ssh/authorized_keys file to enable access from authorized hosts without having to enter your password. TSCC allows all users to access TSCC via RSA keys. To login to the TSCC, use the following hostname: įollowing are examples of Secure Shell (ssh) commands that may be used to login to the TSCC: ssh -l TSCC supports command line authentication using your UCSD AD password, or via ssh keys (for non-UCSD users). For more information, contact to topĪll users on the Triton Shared Computing Cluster and associated resources must agree to comply with the Acceptable Use Policy. Project storage can be purchased by sending e-mail to persistent storage can be mounted from lab file servers over the campus network or purchased from SDSC. Long-term file storage should be maintained in your $HOME directory or project storage. Data Oasis storage is not backed up and files stored on this system may be lost or destroyed without recourse to restore them. There is a 90–day purge policy on Data Oasis. TSCC users will receive 100GB of backed-up home file storage, and shared access to the 800+ TB Data Oasis Lustre-based high performance parallel file system. Please use the command pbsnodes -a to verify the node properties such as the processor type and the ibgroup. All Cascade/Skylake nodes are on the EDR network with ibgroup4. All Sandy nodes are on the FDR network with ibgroup0.
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TSCC has 2 ibgroups available for the FDR IB network and the EDR IB network. TSCC nodes can have either a single port 10GbE network interface or an optional EDR InfiniBand/FDR Infiniband (IB) connect for low latency parallel applications. The current specifications for each type of node can be found on the Purchase Info page.
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The TSCC group will periodically update the hardware choices for general computing and GPU condo node purchases, to keep abreast of technological and cost advances. There are three kinds of compute nodes in the cluster: General Computing Nodes, GPU Nodes, and Large Memory Nodes. System Information Hardware Specifications